FOX/ObjCryst++
1.10.X (development)
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This is the complete list of members for ObjCryst::MolBond, including all inherited members.
BondOrder() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
CalcGradient(std::map< MolAtom *, XYZ > &m) const | ObjCryst::MolBond | |
GetAtom1() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetAtom1() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetAtom2() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetAtom2() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetBondOrder() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetDeriv(const std::map< const MolAtom *, XYZ > &m, const bool llk=false) const | ObjCryst::MolBond | |
GetLength() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetLength0() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetLengthDelta() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetLengthSigma() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetLogLikelihood() const | ObjCryst::MolBond | virtual |
GetLogLikelihood(const bool calcDeriv, const bool recalc) const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetMolecule() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetMolecule() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
GetName() const | ObjCryst::MolBond | |
GetType() const (defined in ObjCryst::Restraint) | ObjCryst::Restraint | virtual |
IsFreeTorsion() const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
Length0() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
LengthDelta() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
LengthSigma() (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
mAtomPair (defined in ObjCryst::MolBond) | ObjCryst::MolBond | private |
mBondOrder (defined in ObjCryst::MolBond) | ObjCryst::MolBond | private |
mDelta (defined in ObjCryst::MolBond) | ObjCryst::MolBond | private |
mDerivAtom1 | ObjCryst::MolBond | mutableprivate |
mDerivAtom2 (defined in ObjCryst::MolBond) | ObjCryst::MolBond | mutableprivate |
mDerivLLKCoeff | ObjCryst::MolBond | mutableprivate |
mIsFreeTorsion (defined in ObjCryst::MolBond) | ObjCryst::MolBond | private |
mLength0 (defined in ObjCryst::MolBond) | ObjCryst::MolBond | private |
mLLK | ObjCryst::MolBond | mutableprivate |
MolBond(MolAtom &atom1, MolAtom &atom2, const REAL length, const REAL sigma, const REAL delta, Molecule &parent, const REAL bondOrder=1.) | ObjCryst::MolBond | |
mpMol | ObjCryst::MolBond | private |
mSigma (defined in ObjCryst::MolBond) | ObjCryst::MolBond | private |
Restraint() | ObjCryst::Restraint | |
Restraint(const RefParType *type) | ObjCryst::Restraint | |
SetAtom1(MolAtom &at1) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetAtom2(MolAtom &at2) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetBondOrder(const REAL length) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetFreeTorsion(const bool isInRing) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetLength0(const REAL length) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetLengthDelta(const REAL length) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetLengthSigma(const REAL length) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | |
SetType(const RefParType *type) (defined in ObjCryst::Restraint) | ObjCryst::Restraint | virtual |
XMLInput(istream &is, const XMLCrystTag &tag) (defined in ObjCryst::MolBond) | ObjCryst::MolBond | virtual |
XMLOutput(ostream &os, int indent=0) const (defined in ObjCryst::MolBond) | ObjCryst::MolBond | virtual |
~MolBond() | ObjCryst::MolBond | virtual |
~Restraint() (defined in ObjCryst::Restraint) | ObjCryst::Restraint | virtual |