AddOption(RefObjOpt *opt) | ObjCryst::RefinableObj | protected |
AddPar(const RefinablePar &newRefPar) | ObjCryst::RefinableObj | |
AddPar(RefinablePar *newRefPar) | ObjCryst::RefinableObj | |
AddPar(RefinableObj &newRefParList, const bool copyParam=false) | ObjCryst::RefinableObj | |
AddRestraint(Restraint *pNewRestraint) | ObjCryst::RefinableObj | |
AddSubRefObj(RefinableObj &) | ObjCryst::RefinableObj | protected |
BeginGlobalOptRandomMove() | ObjCryst::RefinableObj | |
BeginOptimization(const bool allowApproximations=false, const bool enableRestraints=false) | ObjCryst::ScatteringData | virtual |
CalcGeomStructFactor() const | ObjCryst::ScatteringData | protected |
CalcGeomStructFactor_FullDeriv(std::set< RefinablePar * > &vPar) (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | protected |
CalcGlobalTemperatureFactor() const | ObjCryst::ScatteringData | protected |
CalcLuzzatiFactor() const | ObjCryst::ScatteringData | protected |
CalcResonantScattFactor() const | ObjCryst::ScatteringData | protectedvirtual |
CalcScattFactor() const | ObjCryst::ScatteringData | protected |
CalcSinThetaLambda() const | ObjCryst::ScatteringData | protectedvirtual |
CalcSinThetaLambda(REAL h, REAL k, REAL l) const | ObjCryst::ScatteringData | protected |
CalcStructFactor() const | ObjCryst::ScatteringData | protected |
CalcStructFactor_FullDeriv(std::set< RefinablePar * > &vPar) (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | protected |
CalcStructFactVariance() const | ObjCryst::ScatteringData | protected |
CalcTemperatureFactor() const | ObjCryst::ScatteringData | protected |
ClearParamSet(const unsigned long id) const | ObjCryst::RefinableObj | |
CreateCopy() const =0 | ObjCryst::ScatteringData | pure virtual |
CreateParamSet(const string name="") const | ObjCryst::RefinableObj | |
DeRegisterClient(RefinableObj &) const | ObjCryst::RefinableObj | virtual |
EliminateExtinctReflections() | ObjCryst::ScatteringData | protected |
EndOptimization() | ObjCryst::ScatteringData | virtual |
EraseAllParamSet() | ObjCryst::RefinableObj | |
FindPar(const string &name) const | ObjCryst::RefinableObj | protected |
FindPar(const REAL *) const | ObjCryst::RefinableObj | protected |
FindParamSet(unsigned long id) const | ObjCryst::RefinableObj | protected |
FixAllPar() | ObjCryst::RefinableObj | |
GenHKLFullSpace(const REAL maxTheta, const bool unique=false) | ObjCryst::ScatteringData | virtual |
GenHKLFullSpace2(const REAL maxsithsl, const bool unique=false) | ObjCryst::ScatteringData | virtual |
GetBMatrix() const | ObjCryst::ScatteringData | protectedvirtual |
GetClassName() const | ObjCryst::RefinableObj | virtual |
GetClientRegistry() const | ObjCryst::RefinableObj | virtual |
GetClientRegistry() | ObjCryst::RefinableObj | virtual |
GetClockMaster() const | ObjCryst::RefinableObj | |
GetClockNbReflBelowMaxSinThetaOvLambda() const | ObjCryst::ScatteringData | |
GetClockTheta() const | ObjCryst::ScatteringData | |
GetCrystal() const | ObjCryst::ScatteringData | |
GetCrystal() | ObjCryst::ScatteringData | |
GetFhklCalcImag() const | ObjCryst::ScatteringData | |
GetFhklCalcReal() const | ObjCryst::ScatteringData | |
GetFhklCalcSq() const | ObjCryst::ScatteringData | |
GetFhklCalcSq_FullDeriv(std::set< RefinablePar * > &vPar) (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |
GetFhklObsSq() const | ObjCryst::ScatteringData | |
GetGeneGroup(const RefinableObj &obj, CrystVector_uint &groupIndex, unsigned int &firstGroup) const | ObjCryst::RefinableObj | virtual |
GetH() const | ObjCryst::ScatteringData | |
GetH2Pi() const | ObjCryst::ScatteringData | |
GetK() const | ObjCryst::ScatteringData | |
GetK2Pi() const | ObjCryst::ScatteringData | |
GetL() const | ObjCryst::ScatteringData | |
GetL2Pi() const | ObjCryst::ScatteringData | |
GetLogLikelihood() const | ObjCryst::RefinableObj | virtual |
GetLSQ_FullDeriv(const unsigned int, std::set< RefinablePar * > &vPar) | ObjCryst::RefinableObj | virtual |
GetLSQCalc(const unsigned int) const | ObjCryst::RefinableObj | virtual |
GetLSQDeriv(const unsigned int, RefinablePar &) | ObjCryst::RefinableObj | virtual |
GetLSQObs(const unsigned int) const | ObjCryst::RefinableObj | virtual |
GetLSQWeight(const unsigned int) const | ObjCryst::RefinableObj | virtual |
GetMaxSinThetaOvLambda() const | ObjCryst::ScatteringData | |
GetName() const | ObjCryst::RefinableObj | virtual |
GetNbLSQFunction() const | ObjCryst::RefinableObj | virtual |
GetNbOption() const | ObjCryst::RefinableObj | |
GetNbPar() const | ObjCryst::RefinableObj | |
GetNbParNotFixed() const | ObjCryst::RefinableObj | |
GetNbRefl() const | ObjCryst::ScatteringData | |
GetNbReflBelowMaxSinThetaOvLambda() const | ObjCryst::ScatteringData | virtual |
GetOption(const unsigned int i) | ObjCryst::RefinableObj | |
GetOption(const unsigned int i) const | ObjCryst::RefinableObj | |
GetPar(const long i) | ObjCryst::RefinableObj | |
GetPar(const long i) const | ObjCryst::RefinableObj | |
GetPar(const string &name) | ObjCryst::RefinableObj | |
GetPar(const string &name) const | ObjCryst::RefinableObj | |
GetPar(const REAL *) | ObjCryst::RefinableObj | |
GetPar(const REAL *) const | ObjCryst::RefinableObj | |
GetParamSet(const unsigned long setId) const | ObjCryst::RefinableObj | |
GetParamSet(const unsigned long setId) | ObjCryst::RefinableObj | |
GetParamSet_ParNotFixedHumanValue(const unsigned long setId, const long parNumber) const | ObjCryst::RefinableObj | |
GetParamSetName(const unsigned long setId) const | ObjCryst::RefinableObj | |
GetParNotFixed(const long i) | ObjCryst::RefinableObj | |
GetParNotFixed(const long i) const | ObjCryst::RefinableObj | |
GetRadiation() const =0 | ObjCryst::ScatteringData | pure virtual |
GetRadiationType() const | ObjCryst::ScatteringData | |
GetReflX() const | ObjCryst::ScatteringData | |
GetReflY() const | ObjCryst::ScatteringData | |
GetReflZ() const | ObjCryst::ScatteringData | |
GetRefParListClock() const | ObjCryst::RefinableObj | |
GetRestraintCost() const | ObjCryst::RefinableObj | virtual |
GetScatteringFactor() const | ObjCryst::ScatteringData | |
GetSinThetaOverLambda() const | ObjCryst::ScatteringData | |
GetSubObjRegistry() | ObjCryst::RefinableObj | |
GetSubObjRegistry() const | ObjCryst::RefinableObj | |
GetTheta() const | ObjCryst::ScatteringData | |
GetWavelength() const | ObjCryst::ScatteringData | |
GlobalOptRandomMove(const REAL mutationAmplitude, const RefParType *type=gpRefParTypeObjCryst) | ObjCryst::RefinableObj | virtual |
HasCrystal() const | ObjCryst::ScatteringData | |
IsBeingRefined() const | ObjCryst::RefinableObj | |
IsIgnoringImagScattFact() const | ObjCryst::ScatteringData | |
mClientObjRegistry | ObjCryst::RefinableObj | mutableprotected |
mClockFhklCalcVariance (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mClockFhklObsSq | ObjCryst::ScatteringData | protected |
mClockGeomStructFact | ObjCryst::ScatteringData | mutableprotected |
mClockGlobalBiso | ObjCryst::ScatteringData | protected |
mClockGlobalTemperatureFact | ObjCryst::ScatteringData | mutableprotected |
mClockHKL | ObjCryst::ScatteringData | protected |
mClockLuzzatiFactor (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mClockMaster | ObjCryst::RefinableObj | protected |
mClockNbReflUsed | ObjCryst::ScatteringData | mutableprotected |
mClockScattFactor | ObjCryst::ScatteringData | mutableprotected |
mClockScattFactorResonant | ObjCryst::ScatteringData | mutableprotected |
mClockStructFactor | ObjCryst::ScatteringData | mutableprotected |
mClockStructFactorSq | ObjCryst::ScatteringData | mutableprotected |
mClockThermicFact | ObjCryst::ScatteringData | mutableprotected |
mClockTheta | ObjCryst::ScatteringData | mutableprotected |
mDeleteRefParInDestructor | ObjCryst::RefinableObj | protected |
mExpectedIntensityFactor | ObjCryst::ScatteringData | protected |
mFhklCalcImag (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mFhklCalcImag_FullDeriv (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mFhklCalcReal | ObjCryst::ScatteringData | mutableprotected |
mFhklCalcReal_FullDeriv (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mFhklCalcSq | ObjCryst::ScatteringData | mutableprotected |
mFhklCalcSq_FullDeriv (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mFhklCalcVariance | ObjCryst::ScatteringData | mutableprotected |
mFhklObsSq | ObjCryst::ScatteringData | protected |
mGlobalBiso | ObjCryst::ScatteringData | protected |
mGlobalTemperatureFactor | ObjCryst::ScatteringData | mutableprotected |
mH | ObjCryst::ScatteringData | protected |
mH2Pi | ObjCryst::ScatteringData | mutableprotected |
mIgnoreImagScattFact | ObjCryst::ScatteringData | protected |
mIntH | ObjCryst::ScatteringData | mutableprotected |
mIntK (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mIntL (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mK (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | protected |
mK2Pi (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mL (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | protected |
mL2Pi (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mLSQ_FullDeriv | ObjCryst::RefinableObj | mutableprotected |
mLSQDeriv | ObjCryst::RefinableObj | mutableprotected |
mMaxSinThetaOvLambda | ObjCryst::ScatteringData | protected |
mMultiplicity | ObjCryst::ScatteringData | protected |
mName | ObjCryst::RefinableObj | protected |
mNbRefl | ObjCryst::ScatteringData | protected |
mNbReflUsed | ObjCryst::ScatteringData | mutableprotected |
mNbRefParNotFixed | ObjCryst::RefinableObj | mutableprotected |
mOptimizationDepth | ObjCryst::RefinableObj | protected |
mOptionRegistry | ObjCryst::RefinableObj | protected |
mpCrystal | ObjCryst::ScatteringData | protected |
mRandomMoveIsDone | ObjCryst::RefinableObj | protected |
mRefParListClock | ObjCryst::RefinableObj | protected |
mRefparNotFixedIndex | ObjCryst::RefinableObj | mutableprotected |
mSinThetaLambda | ObjCryst::ScatteringData | mutableprotected |
mSubObjRegistry | ObjCryst::RefinableObj | protected |
mTheta | ObjCryst::ScatteringData | mutableprotected |
mUseFastLessPreciseFunc | ObjCryst::ScatteringData | protected |
mvFprime | ObjCryst::ScatteringData | mutableprotected |
mvFsecond (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mvImagGeomSF (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mvImagGeomSF_FullDeriv (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mvLuzzatiFactor | ObjCryst::ScatteringData | mutableprotected |
mvpRefPar | ObjCryst::RefinableObj | protected |
mvpRestraint | ObjCryst::RefinableObj | protected |
mvpSavedValuesSet | ObjCryst::RefinableObj | mutableprotected |
mvRealGeomSF | ObjCryst::ScatteringData | mutableprotected |
mvRealGeomSF_FullDeriv (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mvScatteringFactor | ObjCryst::ScatteringData | mutableprotected |
mvTemperatureFactor | ObjCryst::ScatteringData | mutableprotected |
mX | ObjCryst::ScatteringData | mutableprotected |
mY (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
mZ (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | mutableprotected |
operator=(const RefinableObj &old) | ObjCryst::RefinableObj | |
Prepare() | ObjCryst::RefinableObj | protectedvirtual |
PrepareForRefinement() const | ObjCryst::RefinableObj | |
PrepareHKLarrays() | ObjCryst::ScatteringData | protectedvirtual |
Print() const (defined in ObjCryst::RefinableObj) | ObjCryst::RefinableObj | virtual |
PrintFhklCalc(ostream &os=cout) const | ObjCryst::ScatteringData | virtual |
PrintFhklCalcDetail(ostream &os=cout) const | ObjCryst::ScatteringData | virtual |
RandomizeConfiguration() | ObjCryst::RefinableObj | virtual |
RefinableObj() | ObjCryst::RefinableObj | |
RefinableObj(const bool internalUseOnly) | ObjCryst::RefinableObj | |
RefinableObj(const RefinableObj &old) | ObjCryst::RefinableObj | |
RegisterClient(RefinableObj &) const | ObjCryst::RefinableObj | virtual |
RemovePar(RefinablePar *refPar) | ObjCryst::RefinableObj | |
RemoveRestraint(Restraint *pRestraint) | ObjCryst::RefinableObj | |
RemoveSubRefObj(RefinableObj &) | ObjCryst::RefinableObj | protected |
ResetParList() | ObjCryst::RefinableObj | |
RestoreParamSet(const unsigned long id) | ObjCryst::RefinableObj | |
SaveParamSet(const unsigned long id) const | ObjCryst::RefinableObj | |
ScatteringData() (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |
ScatteringData(const ScatteringData &old) (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |
SetApproximationFlag(const bool allow) | ObjCryst::ScatteringData | virtual |
SetCrystal(Crystal &crystal) | ObjCryst::ScatteringData | virtual |
SetDeleteRefParInDestructor(const bool b) | ObjCryst::RefinableObj | |
SetGlobalOptimStep(const RefParType *type, const REAL step) | ObjCryst::RefinableObj | |
SetHKL(const CrystVector_REAL &h, const CrystVector_REAL &k, const CrystVector_REAL &l) | ObjCryst::ScatteringData | virtual |
SetIsIgnoringImagScattFact(const bool b) | ObjCryst::ScatteringData | |
SetLimitsAbsolute(const string &parName, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsAbsolute(const RefParType *type, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsProportional(const string &parName, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsProportional(const RefParType *type, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsRelative(const string &parName, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetLimitsRelative(const RefParType *type, const REAL min, const REAL max) | ObjCryst::RefinableObj | |
SetMaxSinThetaOvLambda(const REAL max) | ObjCryst::ScatteringData | virtual |
SetName(const string &name) | ObjCryst::RefinableObj | virtual |
SetParIsFixed(const long parIndex, const bool fix) | ObjCryst::RefinableObj | |
SetParIsFixed(const string &parName, const bool fix) | ObjCryst::RefinableObj | |
SetParIsFixed(const RefParType *type, const bool fix) | ObjCryst::RefinableObj | |
SetParIsUsed(const string &parName, const bool use) | ObjCryst::RefinableObj | |
SetParIsUsed(const RefParType *type, const bool use) | ObjCryst::RefinableObj | |
SortReflectionBySinThetaOverLambda(const REAL maxSTOL=-1.) | ObjCryst::ScatteringData | protectedvirtual |
TagNewBestConfig() const | ObjCryst::RefinableObj | virtual |
UnFixAllPar() | ObjCryst::RefinableObj | |
UpdateDisplay() const | ObjCryst::RefinableObj | virtual |
XMLInput(istream &is, const XMLCrystTag &tag) | ObjCryst::RefinableObj | virtual |
XMLOutput(ostream &os, int indent=0) const | ObjCryst::RefinableObj | virtual |
~RefinableObj() | ObjCryst::RefinableObj | virtual |
~ScatteringData() (defined in ObjCryst::ScatteringData) | ObjCryst::ScatteringData | |