CObjCryst::AsymmetricUnit | The basic description of spacegroup asymmetric unit |
CObjCryst::BBox | |
CObjCryst::Crystal::BumpMergePar | Storage for anti-bump/merge parameters |
CObjCryst::WXMolecule::CellAtom | Structure to store the Atom parameters |
CObjCryst::WXMolecule::CellBond | Structure to store the bond current values |
CObjCryst::WXMolecule::CellBondAngle | Structure to store the bond angles current values |
CObjCryst::WXMolecule::CellDihedralAngle | Structure to store the dihedral angles current values |
CObjCryst::WXMolecule::CellRigidGroup | |
►Cchar_traits | |
Cci_char_traits | Case-insensitive string class From: Guru of the Week #29 e.g |
CChronometer | Simple chronometer class, with microsecond precision |
CObjCryst::CIF | Main CIF class - parses the stream and separates data blocks, comments, items, loops |
CObjCryst::CIFData::CIFAtom | Atom record |
CObjCryst::CIFData | Holds all the information from a single data_ block from a cif file |
CObjCryst::CrystalPOVRayOptions | Class to store POV-Ray output options |
CCrystArray3D< T > | 3D Vector (Blitz++ mimic) for ObjCryst++ |
CCrystMatrix< T > | 2D Vector library (Blitz++ mimic) for ObjCryst++ |
CCrystVector< T > | Vector library (Blitz++ mimic) for ObjCryst++ |
CCubicSpline | Cubic spline interpolation |
CObjCryst::OptimizationObj::DynamicObjWeight | |
CObjCryst::Molecule::FlipGroup | When 3(A1..1n) or more atoms are connected to a same atom A, it defines a 'flip' group, where it is possible to rotate bonds to their symmetric with respect to one plane defined by atoms Ai-A-Aj |
CFormatFloat | Output a number as a formatted float: |
CFormatHorizVector< T > | Format vector as horiz array: |
CFormatInt | Output a number as a formatted integer: |
CFormatString | Output a string with a fixed length (adding necessary space or removing excess characters) : |
CFormatVertVector< T > | Output one or several vectors as (a) column(s): |
CFormatVertVectorHKLFloats< T > | Output vectors as column arrays, with the first 3 columns printed as integers |
CObjCryst::WXMultiGraph::GraphData | |
CObjCryst::PeakList::hkl | One observed diffraction line, to be indexed |
CObjCryst::PeakList::hkl0 | One set of Miller indices, a possible indexation for a reflection |
CCrystMatrix< T >::ListInitializer | |
CCrystMatrix< T >::ListInitializerSwitch | |
CObjCryst::OptimizationObj::LogLikelihoodStats | Statistics about each object contributing to the overall Log(likelihood) |
CObjCryst::LSQNumObj | (Quick & dirty) Least-Squares Refinement Object with Numerical derivatives |
CObjCryst::MainTracker | A class to hold all trackers |
CObjCryst::MDAtomGroup | Groups of atoms that can be moved using molecular dynamics principles, taking a list of restraints as ptential |
CObjCryst::MolAtom | MolAtom : atom inside a Molecule |
CObjCryst::MolRing | Ring class |
CObjCryst::MolZAtom | Light-weight representation of an atom in the molecule, as a part of a Z-matrix |
Cmp4Vector | |
CmpVector | |
CObjCryst::Crystal::Neighbour | Interatomic distance for a given neighbour |
CObjCryst::Crystal::NeighbourHood | Table of neighbours for a given unique atom |
CObjCryst::NiftyStaticGlobalObjectsInitializer_Crystal | |
CObjCryst::NiftyStaticGlobalObjectsInitializer_RefinableObj | |
CObjCryst::NiftyStaticGlobalObjectsInitializer_Scatterer | |
CObjCryst::NiftyStaticGlobalObjectsInitializer_ScatteringData | |
CObjCryst::NiftyStaticGlobalObjectsInitializer_ScatteringPower | |
CObjCryst::NiftyStaticGlobalObjectsInitializer_UnitCell | |
CObjCryst::ObjCrystException | Exception class for ObjCryst++ library |
CObjCryst::ObjRegistry< T > | Object Registry |
CObjCryst::ObjRegistry< ObjCryst::PowderPatternComponent > | |
CObjCryst::ObjRegistry< ObjCryst::RefinableObj > | |
CObjCryst::ObjRegistry< ObjCryst::RefObjOpt > | |
CObjCryst::ObjRegistry< ObjCryst::Scatterer > | |
CObjCryst::ObjRegistry< ObjCryst::ScatteringPower > | |
CObjCryst::ObjRegistry< ObjCryst::TexturePhaseMarchDollase > | |
CObjCryst::ObjRegistry< ObjCryst::ZAtom > | |
►CObjCryst::OptimizationObj | Base object for Optimization methods |
CObjCryst::MonteCarloObj | Base object for Monte-Carlo Global Optimization methods |
CObjCryst::SimplexObj | Conjugate Gradient Algorithm object |
CObjCryst::PeakList | Class to store positions of observed reflections |
CPOVRayColours | |
CObjCryst::Quaternion | A quaternion class, used to represent the orientation of the molecule |
CObjCryst::RecUnitCell | Lightweight class describing the reciprocal unit cell, for the fast computation of d*_hkl^2 |
►CObjCryst::RefinableObj | Generic Refinable Object |
CObjCryst::CellExplorer | Algorithm class to find the correct indexing from observed peak positions |
CObjCryst::PowderPattern | Powder pattern class, with an observed pattern and several calculated components to modelize the pattern |
CObjCryst::PowderPatternBackgroundBayesianMinimiser | This object is used to estimate the background in a powder pattern, using a Bayesian approach (David & Sivia, Acta Cryst A50 (1994), 703) |
►CObjCryst::PowderPatternComponent | Generic class to compute components (eg the contribution of a given phase, or background) of a powder pattern |
CObjCryst::PowderPatternBackground | Phase to compute a background contribution to a powder pattern using an interpolation |
CObjCryst::PowderPatternDiffraction | Class to compute the contribution to a powder pattern from a crystalline phase |
CObjCryst::Radiation | Class to define the radiation (type, monochromaticity, wavelength(s)) of an experiment |
►CObjCryst::ReflectionProfile | Abstract base class for reflection profiles |
CObjCryst::ReflectionProfileDoubleExponentialPseudoVoigt | Double-Exponential Pseudo-Voigt profile for TOF |
CObjCryst::ReflectionProfilePseudoVoigt | Pseudo-Voigt reflection profile |
CObjCryst::ReflectionProfilePseudoVoigtAnisotropic | Pseudo-Voigt reflection profile, with 6-parameters anisotropic Lorentzian broadening and Toraya asymmetric modelling |
►CObjCryst::Scatterer | Generic type of scatterer: can be an atom, or a more complex assembly of atoms |
CObjCryst::Atom | The basic atom scatterer, in a crystal |
CObjCryst::Molecule | Molecule : class for complex scatterer descriptions using cartesian coordinates with bond length/angle restraints, and moves either of individual atoms or using torsion bonds |
►CObjCryst::ZScatterer | ZScatterer: the basic type of complex scatterers, where atom positions are defined using a standard "Z-Matrix" description |
CObjCryst::ZPolyhedron | ZPolyhedron: a Scatterer to describe polyhedras such as octahedron, tetrahedron, square plane, etc.. |
►CObjCryst::ScatteringData | Class to compute structure factors for a set of reflections and a Crystal |
CObjCryst::DiffractionDataSingleCrystal | DiffractionData object for Single Crystal analysis |
CObjCryst::PowderPatternDiffraction | Class to compute the contribution to a powder pattern from a crystalline phase |
►CObjCryst::ScatteringPower | Abstract Base Class to describe the scattering power of any Scatterer component in a crystal |
CObjCryst::GlobalScatteringPower | Global Scattering Power |
CObjCryst::ScatteringPowerAtom | The Scattering Power for an Atom |
CObjCryst::ScatteringPowerSphere | \ brief ScatteringPower for a spherical particule |
CObjCryst::TextureEllipsoid | Texture correction using the Ellipsoidal preferred orientation function |
CObjCryst::TextureMarchDollase | Texture correction using the March-Dollase model |
►CObjCryst::UnitCell | Unit Cell class: Unit cell with spacegroup information |
CObjCryst::Crystal | Crystal class: Unit cell, spacegroup, scatterers |
CObjCryst::ZMoveMinimizer | Class to minimize conformation changes for random moves |
CObjCryst::RefinableObjClock | We need to record exactly when refinable objects have been modified for the last time (to avoid re-computation), and to do that we need a precise time |
CObjCryst::PowderPatternDiffraction::ReflProfile | Profile of a single reflection |
►CObjCryst::RefObjOpt | Base class for options |
CObjCryst::RefObjOption< T > | Class for options of RefinableObj, templated so that we can warn the object that something has been changed |
CObjCryst::RefParType | Class of refinable parameter types |
►CObjCryst::Restraint | Restraint: generic class for a restraint of a given model |
CObjCryst::MolBond | Bond between two atoms, also a restraint on the associated bond length |
CObjCryst::MolBondAngle | Bond angle restraint between 3 atoms |
CObjCryst::MolDihedralAngle | Dihedral angle restraint between 4 atoms |
CObjCryst::RefinablePar | Generic class for parameters of refinable objects |
CObjCryst::Molecule::RotorGroup | Defines a group of atoms which can be rotated around an axis defined by two other atoms |
CObjCryst::WXCrystal::RowScattPow | Structure to store the scattering power parameters |
CObjCryst::ScatteringComponent | A scattering position in a crystal, associated with the corresponding occupancy and a pointer to the ScatteringPower |
CObjCryst::ScatteringComponentList | List of scattering positions in a crystal, associated with the corresponding occupancy and a pointer to the ScatteringPower |
►CObjCryst::ScatteringCorr | Base class to compute all kind of corrections to intensities: Lorentz, Polar, absorption, texcture, extinction, etc.. |
CObjCryst::LorentzCorr | Lorentz Correction |
CObjCryst::PolarizationCorr | Polarization Correction |
CObjCryst::PowderSlitApertureCorr | Slit aperture correction (for powder) |
CObjCryst::TextureEllipsoid | Texture correction using the Ellipsoidal preferred orientation function |
CObjCryst::TextureMarchDollase | Texture correction using the March-Dollase model |
CObjCryst::TOFCorr | Time-Of-Flight Correction |
►Cset | |
CObjCryst::RigidGroup | Rigid groups of atoms inside a molecule |
CObjCryst::SpaceGroup::SMx | Struct to store rot+trans matrix |
CObjCryst::SpaceGroup | The crystallographic space group, and the cell choice |
CObjCryst::SpeedTestReport | Structure to hold the results of a speedtest (see ObjCryst::SpeedTest()) |
►CObjCryst::StretchMode | Abstract base Stretch Mode for Molecule objects |
CObjCryst::StretchModeBondAngle | Atoms moved when changing a bond angle |
CObjCryst::StretchModeBondLength | Group of atoms for random moves changing a bond length |
CObjCryst::StretchModeTorsion | Atoms moved when rotated around a bond at0-at1-at2-at3 |
CObjCryst::StretchModeTwist | Atoms moved between two other atoms, using a "twist" of their positions - only small twists of their positions are allowed to avoid breaking restraints too much |
CObjCryst::Molecule::StretchModeGroup | Group of concurrent StretchModes (affecting common restraints) A given stretch mode can only belong to one group |
CObjCryst::SymmetricPairCompare< T > | Class to compare pairs of objects, with the two objects playing a symmetric role |
CObjCryst::TexturePhaseMarchDollase | One texture phase for the March-Dollase model |
CObjCryst::tmp_C_Numeric_locale | This class only serves to temporarilly set the LC_NUMERIC C locale to "C", in order to use ' |
►CObjCryst::Tracker | A class to track the variation of parameters as a function of a number of cycles/trials |
CObjCryst::TrackerObject< T > | Tracker for objects (RefinableObj, Crystal, PowderPattern, RefPar,...) |
CTRIANGLE | |
CObjCryst::Triple | |
CObjCryst::SpaceGroup::TRx | Struct to store trans matrix |
CObjCryst::WXCRYST_ID | Class to automatically assign a unique wxID to each window |
CObjCryst::WXCrystObjBasicList | A List of WXCrystObjBasic |
►CwxDialog | |
CObjCryst::wxMultiChoiceDialog_ListBox | Provides the same functionnality as wxMultiChoiceDialog, but always using a wxListBox, which is much easier when selecting a large number of successive choices (using shift-click) |
►CwxGrid | |
CObjCryst::WXCrystalScrolledGridWindow | |
CObjCryst::WXMolScrolledWindow | |
►CwxThread | |
CObjCryst::WXGlobalOptimRunThread | Class for a GlobalOptimization thread |
►CwxWindow | |
►CObjCryst::WXCrystObjBasic | Abstract base class for all objects in wxCryst |
CObjCryst::WXCrystMenuBar | Our own local menu bar, using buttons and Popup menus |
►CObjCryst::WXCrystObj | Base class for all displayed ObjCryst objects (with a title, and a sizer to stack objects) |
CObjCryst::WXLSQ | |
►CObjCryst::WXOptimizationObj | WX Class for a Global Optimization objects |
CObjCryst::WXMonteCarloObj | Class for Graphical interface to Monte-Carlo objects (Simulated Annealing, Parallel Tempering) |
CObjCryst::WXProfileDoubleExponentialPseudoVoigt | Class to display a Powder Pattern Pseudo-Voigt Profile |
CObjCryst::WXProfilePseudoVoigt | Class to display a Powder Pattern Pseudo-Voigt Profile |
CObjCryst::WXProfilePseudoVoigtAnisotropic | Class to display a Powder Pattern Pseudo-Voigt Profile with Anisotropic broadening |
►CObjCryst::WXRefinableObj | The base wxCryst class for all RefinableObj objects |
CObjCryst::WXCrystal | WxCryst class for Crystals |
CObjCryst::WXDiffractionSingleCrystal | WX Class for DiffractionDataSingleCrystal objects |
CObjCryst::WXPowderPattern | WX Class for PowderPattern objects |
CObjCryst::WXPowderPatternBackground | Class to display a Powder Pattern Background |
CObjCryst::WXPowderPatternDiffraction | Class to display a Powder Pattern for a crystalline phase |
►CObjCryst::WXScatterer | Base wxCryst class for Scatterers |
CObjCryst::WXAtom | WxCryst class for Atoms |
CObjCryst::WXMolecule | WxCryst class for Molecule objects |
CObjCryst::WXZScatterer | WxCryst class for ZScatterer objects |
CObjCryst::WXScatteringPowerAtom | WxCryst class for ScatteringPowerAtom |
CObjCryst::WXScatteringPowerSphere | WxCryst class for ScatteringPowerSphere |
CObjCryst::WXTextureMarchDollase | Class to display the Preferred Orientation Correction using the March-Dollase parametrization |
CObjCryst::WXRegistry< T > | This displays all components of a ObjCryst++ Registry |
CObjCryst::WXTextureEllipsoid | Class to display one Preferred Orientation phase using the Ellipsoid model |
CObjCryst::WXRegistry< ObjCryst::PowderPatternComponent > | |
CObjCryst::WXRegistry< ObjCryst::Scatterer > | |
CObjCryst::WXRegistry< ObjCryst::ScatteringPower > | |
CObjCryst::WXRegistry< ObjCryst::ZAtom > | |
►CObjCryst::WXField | This is the abstract base class for all fields, wether they contain a floating-point parameter, or a string,.. |
CObjCryst::WXFieldChoice | Class to pick one choice.. |
CObjCryst::WXFieldName | A field with the name of a WXCrystObj |
CObjCryst::WXFieldOption | WX representation of a RefObj option. This displays the names of the different choices |
►CObjCryst::WXFieldParBase | A field for a parameter |
CObjCryst::WXFieldPar< T > | A field for a parameter |
CObjCryst::WXFieldPar< long > | |
CObjCryst::WXFieldRefPar | A field for a RefinablePar |
CObjCryst::WXFieldString | A field which directly links to a string |
CObjCryst::WXMolAtom | Wx class for MolAtom objects |
CObjCryst::WXMolBond | Wx class for MolBond objects |
CObjCryst::WXMolBondAngle | Wx class for MolBondAngle objects |
CObjCryst::WXMolDihedralAngle | Wx class for MolDihedralAngle objects |
CObjCryst::WXRadiation | WX Class for Radiation |
CObjCryst::WXTexturePhaseMarchDollase | Class to display one Preferred Orientation phase using the March-Dollase parametrization |
CObjCryst::WXZAtom | |
►CObjCryst::WXMultiGraph | |
CObjCryst::WXTrackerGraph | |
CObjCryst::WXPowderPatternGraph | Class to display a Powder Pattern (calc,obs) in a graphic window |
CObjCryst::XMLCrystTag | Class to input or output a well-formatted xml beginning or ending tag |
Cxmm_mm_union | |
CObjCryst::XYZ | Structure holding 3 coordinates, or deriviatives with respect to each of these coordinates |
CObjCryst::ZAtom | Class for individual atoms in a ZScatterer Object |